Archive For The “phenotype” Category

Automated Ontology Building in Ecology

Automated Ontology Building in Ecology

One of the more difficult aspects of trying to apply “big data” thinking in ecology is the massive heterogeneity of terms. I stumble over this issue every time I work on a data set for the Encyclopedia of Life. The many different ways to describe the same habitat (among other things) and the varying granularity…

Semantic Linking of Phenotypes and Environments

Semantic Linking of Phenotypes and Environments

One of the fundamental goals of biology is understanding the interactions of environment and phenotype, but this is a surprisingly difficult topic to study – not because of the concepts, but because of the data. Observations about environment and phenotype occur in separate data sets and the terms used are far too idiosyncratic for automated…

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